miiid-schema

Minimal Information about Intermicrobial Interaction Data schema

URI: https://w3id.org/FAIR-MI/miiid-schema

Name: miiid-schema

Classes

Class	Description
IntermicrobialInteractionCollection	A holder for IntermicrobialInteraction objects
NamedThing	A generic grouping for any identifiable entity
IntermicrobialInteraction	Represents an interaction between microbial entities

Slot	Description
description	A human-readable description for a thing
entries	An IntermicrobialInteraction object
env_exp	Biome term (from the Environmental Ontology) used in the experiment
evidence_type	Type of evidence used to determine the interaction using the Evidence and Con...
id	A unique identifier for a thing
method_type	One or several of the types of methods used to determine the interaction
name	A human-readable name for a thing
participant_outcomes	Outcomes of each of the participants described in the interaction when known
participants	Names of the microbial entities, with descriptions of any genetic manipulatio...
reference	Persistent identifier (e
sequence_id	Accession to the matching sequence data (e
tax_id	NCBI Taxonomy identifiers at the relevant taxonomic level

Enumeration	Description
MethodType	List of methods used to determine interactions
ParticipantOutcome	Outcome indicating how each participant was affected

Type	Description
Boolean	A binary (true or false) value
Curie	a compact URI
Date	a date (year, month and day) in an idealized calendar
DateOrDatetime	Either a date or a datetime
Datetime	The combination of a date and time
Decimal	A real number with arbitrary precision that conforms to the xsd:decimal speci...
Double	A real number that conforms to the xsd:double specification
EnvExpId	Term from the Environment Ontology following by their machine-actionable iden...
Float	A real number that conforms to the xsd:float specification
Integer	An integer
NCBITaxId	Numeric identifier following the NCBI Taxonomy schema
Ncname	Prefix part of CURIE
Nodeidentifier	A URI, CURIE or BNODE that represents a node in a model
Objectidentifier	A URI or CURIE that represents an object in the model
SequenceId	Sequence identifier to a (preferrably INSDC) database
String	A character string
Time	A time object represents a (local) time of day, independent of any particular...
Uri	a complete URI
Uriorcurie	a URI or a CURIE

Subset	Description