Enum: MethodType

List of methods used to determine interactions

Permissible Values

Value	Meaning	Description
simulation	EDAM_TOPIC:3524	Any type of biological computational model experiments
microscopy	EDAM_TOPIC:3382	Any type of imaging-related experiments
cultivation	NCIT:C25300	Any laboratory procedure for growing microorganisms
sample	OBI:0000659	Any type of experiments based on the analysis of a sample

Slots

Name	Description
method_type	One or several of the types of methods used to determine the interaction

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/FAIR-MI/miiid-schema

LinkML Source

name: MethodType
description: List of methods used to determine interactions
from_schema: https://w3id.org/FAIR-MI/miiid-schema
rank: 1000
permissible_values:
  simulation:
    text: simulation
    description: Any type of biological computational model experiments
    meaning: EDAM_TOPIC:3524
    examples:
    - value: generalized Lotka-Volterra model
    - value: genome-scale metabolic model
  microscopy:
    text: microscopy
    description: Any type of imaging-related experiments
    meaning: EDAM_TOPIC:3382
    examples:
    - value: co-localization with fluorescent markers
    - value: assisted motility
  cultivation:
    text: cultivation
    description: Any laboratory procedure for growing microorganisms
    meaning: NCIT:C25300
    examples:
    - value: continuous co-culture in bioreactor
    - value: co-plating on solid media
  sample:
    text: sample
    description: Any type of experiments based on the analysis of a sample
    meaning: OBI:0000659
    examples:
    - value: co-occurrences drawn from analyses of abundances obtained from in situ
        or in vivo sampling